BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031F12SP1|AL429445
(994 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig608 595 e-170
3x_Contig449 254 2e-67
>3x_Contig608
Length = 2255
Score = 595 bits (300), Expect = e-170
Identities = 338/350 (96%), Gaps = 1/350 (0%)
Strand = Plus / Plus
Query: 645 catcgacataagagcctgatggaacaccctttggatactcaccttctttcaagttggcag 704
|||||||||||||||||||||||||||||||||||||| | | ||| ||||||||||
Sbjct: 32 catcgacataagagcctgatggaacaccctttggatacaaaaaatatttaaagttggcag 91
Query: 705 tcaacaaaacagctttaacaatagcccacatggagtgtagagccgtttctttcaaaccat 764
|||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 92 tcaaaaaaacagatttaacaatagccaacatggagtgtagagccgtttctttcaaaccat 151
Query: 765 atgactcattgacttgctcagctaaaaccttcaaagatggttcaacgtattccaagaagt 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 atgactcattgacttgctcagctaaaaccttcaaagatggttcaacgtattccaagaagt 211
Query: 825 gttctttggaagcaatggctaattctgacaaagcagcagcagcaacttccttttcgtatg 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gttctttggaagcaatggctaattctgacaaagcagcagcagcaacttccttttcgtatg 271
Query: 885 cgataccagtgtttacggtaaatttgctttgtagttcttcttcatccaaatcttcgatgc 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 cgataccagtgtttacggtaaatttgctttgtagttcttcttcatccaaatcttcgatgc 331
Query: 945 cttcccaagaagtcttcgtcaccgtcaaagttaawttggtattcttcttg 994
||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 332 ctt-ccaagaagtcttcgtcaccgtcaaagttaaattggtattcttcttg 380
>3x_Contig449
Length = 1952
Score = 254 bits (128), Expect = 2e-67
Identities = 136/139 (97%)
Strand = Plus / Plus
Query: 1 cagcaacgctcaaaatttcgtataaggattttagaactggagaatagatagcagaaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1814 cagcaacgctcaaaatttcgtataaggattttagaactggagaatagatagcagaaacat 1873
Query: 61 cgaatgatgaatattcaatcaacaaaccaacaccgtatgaagcattacatctgacttcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1874 cgaatgatgaatattcaatcaacaaaccaacaccgtatgaagcattacatctgacttcta 1933
Query: 121 atgatttatcattagtcaa 139
|| | |||||||||||||
Sbjct: 1934 atattntatcattagtcaa 1952
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9048
Number of Sequences: 1807
Number of extensions: 9048
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 2
length of query: 994
length of database: 10,358,551
effective HSP length: 16
effective length of query: 978
effective length of database: 10,329,639
effective search space: 10102386942
effective search space used: 10102386942
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)